Ders:  Ağ Yapıları

İçerik: Ağ yapılarının özellikleri, dayanıklılık ve senkronizasyon; yaşam bilimlerinde ağ yapıları ve bazı evrilme mekanizmaları.

DERS NOTLARI İÇİN TIKLAYIN

Okuma listesi, alfabetik sırayla:

• Albert R, Barabasi, AL (2001) Statistical mechanics of complex networks. Rev Mod Phys 74: 47-97.

• Dorogovstsev SN, Mendes JFF (2002) Evolution of networks. Adv Phys 51: 1079-1187.

• Barabasi AL, Oltvai ZN (2004) Network biology: understanding the cell’s functional organization. Nature Reviews-Genetics 5: 101-113

• Balcan D, Kabakçıoğlu A, Mungan M and Erzan A 2007b The Information Coded in the Yeast Response Elements Accounts for Most of the Topological Properties of Its Transcriptional Regulation Network; PLoS ONE 2 e501

• Colizza V, Flammini A, Maritan A, Vespignani A (2005) Characterization and modeling of protein-protein interaction networks. Physica A 352: 1-27.

• Sole RV, Pastor-Satorras R (2002) Complex Networks in Genomics and Proteomics. In: Bornholdt S, Schuster HG, eds (2002) Handbook of Graphs and Networks. Berlin: Wiley-VCH Verlag

• Wagner A 1994 Evolution of gene networks by gene duplications: a mathematical model and its implications on genome organization; Proc. Natl. Acad. Sci. USA 91 4387-4391

Ek okumalar:

• Hannon GJ 2002 RNA interference; Nature  418 244-251

• Perelson AS, Weisbuch G (1997) Immunology for physicists. Rev Mod Phys 69:1219-1267.